Species: Panax notoginseng
Sample
Sample Location: Seeds were routinely harvested from the 3-year-old P.notoginseng, which was cultivated from the field in the company of Wenshan County, Yunnan Province, China in November 2014.
Sample Part: seeds
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: 124,419,896 raw reads, 112,279,780 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 169,594 transcripts, the mean length of 860 bp. 120,639 unique sequences with a mean length of 663 bp
Annotation Method: NR, Swiss-Prot, KOG, KEGG, GO
Reference
Kai, Yang, Ling, et al. Illumina-based transcriptomic analysis on recalcitrant seeds of Panax notoginseng for the dormancy release during the after-ripening process.[J]. Physiologia Plantarum, 2018.
Reference url