Species: Panax japonicus
Accession Number
SUB6859847
Sample
Sample Location: Enshi (30° 16′N, 109° 54′ E), Hubei province of China
Sample Part: roots
Sequencing
Sequencing platform: Illumina HiSeq X Ten, PacBio Sequel
Sequencing data: The Illumina sequencing analysis yielded 62.2 G clean reads, while SMRT sequencing yielded 256,605 insert reads, including 211,209 full-length non-chimeric reads
Assembly and Annotation
Assembly software: SMRT Analysis software, CDHIT
Assembly result: 71,853 transcripts
Annotation Method: Nr, SwissProt, GO, COG, KOG, Pfam, KEGG
Reference
Xu Ran,Zhang Jiao,You Jingmao,Gao Limei,Li Yongchang,Zhang Shaopeng,Zhu Wenjun,Shu Shaohua,Xiong Chao,Xiong Hui,Chen Ping,Guo Jie,Liu Zhiguo. Full-length transcriptome sequencing and modular organization analysis of oleanolic acid- and dammarane-type saponin related gene expression patterns in Panax japonicus[J]. Genomics,2020(prepublish).
Reference url