Species: Crocus sativus
Accession Number
GSE103181
Sample
Sample Location: Chongming Island, Shanghai, China
Sample Part: stigmas
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: raw reads 129,436,292,clean reads 120,064,554, average lengths of 123.28 bp. The Q20 percentages (sequencing error rate <0.1%) and GC percentages obtained were >99% and 40%, respectively. 61,202 unigenes with a max length of 13,619 bp.
Assembly and Annotation
Assembly software: Trinity
Assembly result: 61,202 unigenes with a max length of 13,619 bp.
Annotation Method: NR, KEGG, COG, GO
Data Url
Reference
Hexin Tan , Xianghui Chen, Nan Liang et al. Transcriptome analysis reveals novel enzymes for apo-carotenoid biosynthesis in saffron and allows construction of a pathway for crocetin synthesis in yeast[J]. J Exp Bot, 2019, 70(18): 4819-4834.
