Species: Bletilla striata
Accession Number
SRR7058048
Sample
Sample Location: Departmentof Medical Cell Biology, Zunyi Medical University, Zunyi, Guizhou, China
Sample Part: roots,stems, leaves and pollenated capsules
Sequencing
Sequencing platform: Illumina HiSeq 2000
Sequencing data: 109,714,290 paired-end raw data reads and 106,054,784 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 127,261 overlapping unigenes unigenes showed a minimum, maximum and mean length of 201 bp, 21,950 bp, and 612 bp, respectively, an N50 of 957 bp, and an N90 of 249 bp.
Annotation Method: NR, NT, KEGG, Swiss-Prot, Pfam, GO, KOG
Data Url
Reference
Xu D , Chen H , Aci M , et al. De Novo assembly, characterization and development of EST-SSRs from Bletilla striata transcriptomes profiled throughout the whole growing period[J]. Plos One, 2018, 13(10).
