Species: Notopterygium incisum
Sample
Sample Location: in Qinghai, Shanxi, and Sichuan provinces in western China
Sample Part: leaves, stems, and flowers
Sequencing
Sequencing platform: Illumina HiSeq
Sequencing data: 56,759,848 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 259,314 transcripts, the mean length of 791 bp, N50 of 1247 bp, and 120,716 unigenes, N50 of 850 bp, total lengths ranging from 200 to 10,632 bp.
Annotation Method: Nr, GO, KEGG, Swissprot, KOG
Reference
Jia Y , Bai J Q , Liu M L , et al. Transcriptome analysis of the endangered Notopterygium incisum: Cold-tolerance gene discovery and identification of EST-SSR and SNP markers. Plant diversity, 2019, 41(1): 1-6.
Reference url