Species: Isodon lophanthoides var. lophanthoides
Sample
Sample Location: the Guangdong Research Institute of Traditional Chinese Medicine (Guangzhou, Guangdong 51052, China) in October 2014
Sample Part: leaves, roots, stems and whole flowers
Sequencing
Sequencing platform: Illumina HiSeq 2500
Sequencing data: 35,434,964 raw reads and 35,433,952 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 103,221 contigs with an average length of 1,027 bp and an N50 value of 1,516 bp
Annotation Method: Nr, GO
Reference
Huang S , Hu W , Zeng S , et al. Comparative transcriptome analysis and simple sequence repeat marker development for two closely related Isodon species used as 'Xihuangcao' herbs[J]. Tropical Journal of Pharmaceutical Research, 2019, 18(1): 75-84.
Reference url